| ID | Title | Section/Topic | Authors | Keywords |
|---|
| 665 | Absolute dosage and functional diversification drive majority of gene retention following polyploidy in the Compositae
Log in to add this item to your schedule | Genomics / Proteomics | Sessa, Emily; Barker, Michael. | Asteraceae
dosage balance hypothesis
neofunctionalization
subfunctionalization
absolute dosage
paleopolyploidy
functional divergence of gene duplicates
gene ontology (GO) |
| 426 | Characterizing Biochemical Phenotypes through a Metabolite Analysis Platform: Research Communication Enabled through Public Ontologies and Controlled Vocabularies
Log in to add this item to your schedule | Genomics / Proteomics | Eilers, Robert J.. | metabolite analysis
Ontology
controlled vocabulary
analytical biochemistry
biochemical phenotypes |
| 676 | Comparative genomics and lineage specific gene expression in the genus Linum.
Log in to add this item to your schedule | Genomics / Proteomics | Galindo, Leonardo; McDill, Joshua; Wong, Gane Ka-Shu; Deyholos, Michael. | Malpighiales
Illumina
RNA-Seq
genome
transcriptome |
| 511 | Comparative genomics of Brassicales plastomes
Log in to add this item to your schedule | Genomics / Proteomics | Tang, Michelle; Edger, Patrick; Pires, Joseph. | de novo assembly
Comparative methods
Chloroplast DNA
genome evolution |
| 366 | Copy number and expression of chloroplast and nuclear genes belonging to the Photosystem II and Calvin cycle throughout different ploidy levels in Leucanthemum (Compositeae, Anthemideae)
Log in to add this item to your schedule | Genomics / Proteomics | Talianova, Martina; Griesenbeck, Joachim; Oberprieler, Christoph. | Polyploidy
expression
Gene duplications |
| 760 | Development of pentatricopetide repeat (PPR) markers for Penstemon using data from whole genome shotgun sequencing
Log in to add this item to your schedule | Genomics / Proteomics | Wenzel, Aaron; Blischak, Paul; Wolfe, Andrea. | pentatricopeptide repeats
marker development
Penstemon
Plantaginaceae
genome skimming |
| 962 | Evolution of Mitogen Activated Protein Kinase Kinase (MAPKK) Gene Family in Plants
Log in to add this item to your schedule | Genomics / Proteomics | MacArthur , Kenton ; Murray, Kevin; Neupane, Achal; Benson, Benjamin; Piya, Sarbottam; Nepal, Madhav. | MAPK genes
gene family
gene duplication
Evolutionary divergence
paralogous genes |
| 775 | Genome-enabled phylogeography in Asclepias cryptoceras (Apocynaceae)
Log in to add this item to your schedule | Genomics / Proteomics | Weitemier, Kevin; Straub, Shannon; Fishbein, Mark; Cronn, Richard; Liston, Aaron. | Asclepias
Apocynaceae
Target Enrichment
Hybridization sequencing
SNP
Next-generation sequencing
Phylogeography
Population genomics |
| 369 | How low can you go? Gene predictions and putative annotations in four species of Penstemon (Plantaginaceae) from ultra low coverage 454 sequencing
Log in to add this item to your schedule | Genomics / Proteomics | Blischak, Paul; Wenzel, Aaron; Stevens, Mikel; Wolfe, Andrea. | sequence annotation
marker development
Plantaginaceae
Penstemon
nuclear markers
pentatricopeptide repeats
MAKER annotation pipeline |
| 298 | Redefining the Pseudoautosomal region boundaries of Carica papaya X chromosome
Log in to add this item to your schedule | Genomics / Proteomics | Lappin, Fiona; Medert, Charles; Mardonovich, Sandra; Wu, Meng; Moore, Richard. | |
| 434 | Searching for alternative splicing candidate genes using next-generation sequencing in Tragopogon (Asteraceae)
Log in to add this item to your schedule | Genomics / Proteomics | Liu, Xiaoxian; Soltis, Pamela; Soltis, Douglas; Barbazuk, W. Brad. | Polyploidization
Tragopogon
RNA alternative splicing
Next-generation sequencing
PicBio error correction. |
| 708 | Structural evolution of mitochondrial genomes in early diverging algal lineages
Log in to add this item to your schedule | Genomics / Proteomics | Allen, Jessica; Mccourt, Richard; Karol, Kenneth. | mitochondrial genome
prasinophyte
Chlorophyta
Algae
Inverted repeat
Phylogenomics |
| 581 | The investigation on protein evolution of Y chromosome in Carica papaya
Log in to add this item to your schedule | Genomics / Proteomics | Wu, Meng; Moore, Richard. | sex chromosomes
Carica papaya
protein evolution |
| 651 | Time after time: Comparing homeolog expression patterns between two independent origins of the allotetraploid fern Polypodium hesperium
Log in to add this item to your schedule | Genomics / Proteomics | Sigel, Erin; Der, Joshua; DE PAMPHILIS, CLAUDE W; Pryer, Kathleen. | fern
hybrid
next generation sequencing
polyploidy
Phylogenomics
Polypodium
reticulation
RNA-Seq
allopolyploidy |
