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| Session | Date/Time | Location | Title | Type | Authors | Keywords |
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Monday, July 29th |
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| PGP001 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | Redefining the Pseudoautosomal region boundaries of Carica papaya X chromosome
Log in to add this item to your schedule | Poster: Genomics / Proteomics | Lappin, Fiona; Medert, Charles; Mardonovich, Sandra; Wu, Meng; Moore, Richard. | |
| PGP002 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | Copy number and expression of chloroplast and nuclear genes belonging to the Photosystem II and Calvin cycle throughout different ploidy levels in Leucanthemum (Compositeae, Anthemideae)
Log in to add this item to your schedule | Poster: Genomics / Proteomics | Talianova, Martina; Griesenbeck, Joachim; Oberprieler, Christoph. | Polyploidy
expression
Gene duplications |
| PGP003 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | Characterizing Biochemical Phenotypes through a Metabolite Analysis Platform: Research Communication Enabled through Public Ontologies and Controlled Vocabularies
Log in to add this item to your schedule | Poster: Genomics / Proteomics | Eilers, Robert J.. | metabolite analysis
Ontology
controlled vocabulary
analytical biochemistry
biochemical phenotypes |
| PGP004 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | Searching for alternative splicing candidate genes using next-generation sequencing in Tragopogon (Asteraceae)
Log in to add this item to your schedule | Poster: Genomics / Proteomics | Liu, Xiaoxian; Soltis, Pamela; Soltis, Douglas; Barbazuk, W. Brad. | Polyploidization
Tragopogon
RNA alternative splicing
Next-generation sequencing
PicBio error correction. |
| PGP005 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | Comparative genomics of Brassicales plastomes
Log in to add this item to your schedule | Poster: Genomics / Proteomics | Tang, Michelle; Edger, Patrick; Pires, Joseph. | de novo assembly
Comparative methods
Chloroplast DNA
genome evolution |
| PGP006 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | The investigation on protein evolution of Y chromosome in Carica papaya
Log in to add this item to your schedule | Poster: Genomics / Proteomics | Wu, Meng; Moore, Richard. | sex chromosomes
Carica papaya
protein evolution |
| PGP007 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | Comparative genomics and lineage specific gene expression in the genus Linum.
Log in to add this item to your schedule | Poster: Genomics / Proteomics | Galindo, Leonardo; McDill, Joshua; Wong, Gane Ka-Shu; Deyholos, Michael. | Malpighiales
Illumina
RNA-Seq
genome
transcriptome |
| PGP008 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | Development of pentatricopetide repeat (PPR) markers for Penstemon using data from whole genome shotgun sequencing
Log in to add this item to your schedule | Poster: Genomics / Proteomics | Wenzel, Aaron; Blischak, Paul; Wolfe, Andrea. | pentatricopeptide repeats
marker development
Penstemon
Plantaginaceae
genome skimming |
| PGP009 | July 29th 5:30 pm | Grand Salon A - D/Riverside Hilton | Evolution of Mitogen Activated Protein Kinase Kinase (MAPKK) Gene Family in Plants
Log in to add this item to your schedule | Poster: Genomics / Proteomics | MacArthur , Kenton ; Murray, Kevin; Neupane, Achal; Benson, Benjamin; Piya, Sarbottam; Nepal, Madhav. | MAPK genes
gene family
gene duplication
Evolutionary divergence
paralogous genes |
Tuesday, July 30th |
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| 24001 | July 30th 10:00 am | Newberry/Riverside Hilton | Absolute dosage and functional diversification drive majority of gene retention following polyploidy in the Compositae
Log in to add this item to your schedule | Oral Paper | Sessa, Emily; Barker, Michael. | Asteraceae
dosage balance hypothesis
neofunctionalization
subfunctionalization
absolute dosage
paleopolyploidy
functional divergence of gene duplicates
gene ontology (GO) |
| 24002 | July 30th 10:15 am | Newberry/Riverside Hilton | Time after time: Comparing homeolog expression patterns between two independent origins of the allotetraploid fern Polypodium hesperium
Log in to add this item to your schedule | Oral Paper | Sigel, Erin; Der, Joshua; DE PAMPHILIS, CLAUDE W; Pryer, Kathleen. | fern
hybrid
next generation sequencing
polyploidy
Phylogenomics
Polypodium
reticulation
RNA-Seq
allopolyploidy |
| 24003 | July 30th 10:30 am | Newberry/Riverside Hilton | Structural evolution of mitochondrial genomes in early diverging algal lineages
Log in to add this item to your schedule | Oral Paper | Allen, Jessica; Mccourt, Richard; Karol, Kenneth. | mitochondrial genome
prasinophyte
Chlorophyta
Algae
Inverted repeat
Phylogenomics |
| 24004 | July 30th 10:45 am | Newberry/Riverside Hilton | How low can you go? Gene predictions and putative annotations in four species of Penstemon (Plantaginaceae) from ultra low coverage 454 sequencing
Log in to add this item to your schedule | Oral Paper | Blischak, Paul; Wenzel, Aaron; Stevens, Mikel; Wolfe, Andrea. | sequence annotation
marker development
Plantaginaceae
Penstemon
nuclear markers
pentatricopeptide repeats
MAKER annotation pipeline |
| 24005 | July 30th 11:00 am | Newberry/Riverside Hilton | Genome-enabled phylogeography in Asclepias cryptoceras (Apocynaceae)
Log in to add this item to your schedule | Oral Paper | Weitemier, Kevin; Straub, Shannon; Fishbein, Mark; Cronn, Richard; Liston, Aaron. | Asclepias
Apocynaceae
Target Enrichment
Hybridization sequencing
SNP
Next-generation sequencing
Phylogeography
Population genomics |
